MRI: Acquisition of an SEM-EDS-EBSD-CL Microanalytical System for Solid Earth and Climate Change Research

Funding from the Major Research Instrumentation (MRI) Program grant will support acquisition of an Scanning Electron Microscope with secondary and backscattered electron detectors, electron backscatter diffraction capability, and live-color cathodluminescence capability for the Department of Earth Sciences at the University of Maine. The instrument will be used to support faculty and student research in geodynamics and crustal studies and studies of global climate change. The instrument will be the primary research tool of an early career researcher, but will be utilized by several faculty within the department. The scanning electron microscope facility is unique within the state of Maine and will thus operate as a regional facility for research collaboration with scientists from other universities, state government agencies, such as the Maine Geological Survey, and private industry. The facility and its personnel will also participate in outreach activities for K-12 education and the Penobscot Indian Nation

Drop Pinch-Off for Discrete Flows from a Capillary

The problem of drop formation and pinch-off from a capillary tube under the influence of gravity has been extensively studied when the internal capillary pressure gradient is constant. This ensures a continuous time independent flow field inside the capillary tube typically of the Poiseuille flow type. Characteristic drop ejection behaviour includes: periodic drop ejection, drop ejection with associated satellite production, complex dripping, chaotic behaviour and jetting. It is well known that this characteristic behaviour is governed by the Weber (We) and Ohnesorge (Oh) numbers (for a given Bond number) and may be delineated in a We verses Oh operability diagram. An in-depth physical understanding of drop ejection is also of great importance to industry where the tight control of drop size and ejection velocity are of critical importance in industrial processes such as sealants used in electronics assembly and inkjet printing. However, the use of such a continuous flow approach for drop ejection in industry is often impractical since such flows cannot be operator controlled. For this reason it is important to investigate so-called discrete pipe flows where the flow can be turned on and off at will. This means the flow inside the pipe is now time-dependent being controlled in a step-wise fashion. As a first stage in the investigation of drop pinch-off behaviour in discrete pipe flows this paper will study the critical pinch-off time required for drop ejection starting from a pendant drop. This is the discrete amount of time the pipe flow is turned on for in order for a drop to be ejected from the capillary. A Newtonian incompressible free-surface CFD flow code developed at the University of Leeds is used to investigate the critical pinch-off time for a range of internal pipe velocities (the central flow maximum in Poiseuille flow). It is found that the time required for drop ejection to occur decreases exponentially with internal pipe velocity. These characteristic times are also far smaller than typical static drop release times expected from Harkins and Brown analyses. The phenomenology of the process is due to the creation of a capillary wave at the pipe exit upon the sudden turning on of the flow inside the pipe. The capillary wave acts to transport fluid from the upper part of the forming pendant drop at the end of the capillary to the lower part of the drop both lowering the pendant drop centre-of-mass and thinning the neck region connecting the drop to the pipe. This allows the drop to be pinched off at an earlier than expected time as compared to static drop release times

Gene-rich germline-restricted chromosomes in black-winged fungus gnats evolved through hybridization

Germline-restricted DNA has evolved in diverse animal taxa and is found in several vertebrate clades, nematodes, and flies. In these lineages, either portions of chromosomes or entire chromosomes are eliminated from somatic cells early in development, restricting portions of the genome to the germline. Little is known about why germline-restricted DNA has evolved, especially in flies, in which 3 diverse families, Chironomidae, Cecidomyiidae, and Sciaridae, carry germline-restricted chromosomes (GRCs). We conducted a genomic analysis of GRCs in the fungus gnat Bradysia (Sciara) coprophila (Diptera: Sciaridae), which has 2 large germline-restricted “L” chromosomes. We sequenced and assembled the genome of B. coprophila and used differences in sequence coverage and k-mer frequency between somatic and germline tissues to identify GRC sequence and compare it to the other chromosomes in the genome. We found that the GRCs in B. coprophila are large, gene rich, and have many genes with divergent homologs on other chromosomes in the genome. We also found that 2 divergent GRCs exist in the population we sequenced. GRC genes are more similar in sequence to genes from another Dipteran family (Cecidomyiidae) than to homologous genes from Sciaridae. This unexpected finding suggests that these chromosomes likely arose in Sciaridae through hybridization with a related lineage. These results provide a foundation from which to answer many questions about the evolution of GRCs in Sciaridae, such as how this hybridization event resulted in GRCs and what features on these chromosomes cause them to be restricted to the germline

Evolution of the Phenolic Content and Extractability Indices During Ripening of Nebbiolo Grapes from the Piedmont Growing Areas over Six Consecutive Years

The phenolic composition and extractability indices of grape berries play a key role in assessing redwine quality because the relationship between grape phenolic maturity and wine phenolic compositionis well known. In this work, grape quality indices were determined in Nebbiolo grapes from two growingareas of Langhe (South Piedmont), at different stages throughout the ripening process in six consecutiveyears (2004 to 2009), with the aim of evaluating the ripening- and growing area-related changes in thegrape indices separately. The effect of vintage was also investigated. Ripeness data were compared withanalogous data determined in Nebbiolo grapes grown in the Carema area (North Piedmont). The vintageeffect far outweighed any changes in the grape indices introduced by the ripening stage, even those arisingfrom differences in the production area. In the Langhe and Carema zones, the average berry mass, pH,total acidity, total anthocyanins extractable at pH 3.2, total flavonoids and non-anthocyanin flavonoidsextractable at pH 1, and the seed maturity index were seasonally dependent. The more ripening-affectedparameters were the technological ones. This work highlights the importance of determining the phenolextractability, since it provides relevant information that allows improved management of the macerationstage

Autonomous, high-resolution observations of particle flux in the oligotrophic ocean

© The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Biogeosciences 10 (2013): 5517-5531, doi:10.5194/bg-10-5517-2013.Observational gaps limit our understanding of particle flux attenuation through the upper mesopelagic because available measurements (sediment traps and radiochemical tracers) have limited temporal resolution, are labor-intensive, and require ship support. Here, we conceptually evaluate an autonomous, optical proxy-based method for high-resolution observations of particle flux. We present four continuous records of particle flux collected with autonomous profiling floats in the western Sargasso Sea and the subtropical North Pacific, as well as one shorter record of depth-resolved particle flux near the Bermuda Atlantic Time-series Study (BATS) and Oceanic Flux Program (OFP) sites. These observations illustrate strong variability in particle flux over very short (~1-day) timescales, but at longer timescales they reflect patterns of variability previously recorded during sediment trap time series. While particle flux attenuation at BATS/OFP agreed with the canonical power-law model when observations were averaged over a month, flux attenuation was highly variable on timescales of 1–3 days. Particle fluxes at different depths were decoupled from one another and from particle concentrations and chlorophyll fluorescence in the immediately overlying surface water, consistent with horizontal advection of settling particles. We finally present an approach for calibrating this optical proxy in units of carbon flux, discuss in detail the related, inherent physical and optical assumptions, and look forward toward the requirements for the quantitative application of this method in highly time-resolved studies of particle export and flux attenuation.M.L.E. was supported by a WHOI Postdoctoral Scholar fellowship, and the floats used in this project were funded by the above NASA grant and by ONR (DURIP, N00014-10-1-0776)

Asymptotic stability and blow up for a semilinear damped wave equation with dynamic boundary conditions

In this paper we consider a multi-dimensional wave equation with dynamic boundary conditions, related to the Kelvin-Voigt damping. Global existence and asymptotic stability of solutions starting in a stable set are proved. Blow up for solutions of the problem with linear dynamic boundary conditions with initial data in the unstable set is also obtained

Assessement of sensory firmness and crunchiness of table grapes by acoustic and mechanical properties.

Background and Aims The instrumental measurement of crunchiness in tablegrapes has been the subject of little research in spite of the great relevance of this sensory texture trait to consumer preference. Therefore, our aim was to evaluate the potential of several mechanical and acoustic properties to assess the perceived firmness and crunchiness of tablegrape cultivars. Methods and Results The ripening effect was minimised by densimetric sorting of the berries before testing. The textural quality of seven tablegrape cultivars was evaluated by sensory analysis. Furthermore, three mechanical tests (texture profile analysis, cutting and denture) were performed on the berry flesh or on whole berries, and the acoustic emission produced was recorded simultaneously. Correlation studies showed strong and significant relationships between sensory texture attributes and instrumental parameters, particularly for the denture test. Nevertheless, satisfactory predictive accuracy for the perceived crunchiness required multivariate linear regression involving both mechanical and acoustic properties resulting from the denture test performed on whole berries. In this case, residual predictive interquartile amplitude was higher than 2. Most of the reliable models developed for perceived firmness are fairly recommended not for quantitative purposes but for fast screening (1.6 < residual predictive interquartile amplitude < 2). Conclusions The standardised protocol proposed permits more objective and quantitative sensory data to be obtained for firmness and crunchiness of tablegrapes. Significance of the Study A combined mechanical–acoustic strategy has not previously been used in tablegrapes and represents a powerful tool for a more complete and exhaustive texture characterisation, particularly firmness and crunchiness, by means of a more objective and standardised protocol

berry heterogeneity as a possible factor affecting the potential of seed mechanical properties to classify wine grape varieties and estimate flavanol release in wine like solution

Seed mechanical properties were instrumentally measured by compression testing in thirty white and red wine grape varieties at harvest. The effect of berry heterogeneity in a vineyard on these seed texture parameters was also evaluated to improve the understanding of intra-sample variability. Furthermore, the mechanical properties of the seeds were assessed as possible predictors of their phenolic extractability. The results show that the texture parameters of the seeds are independent of the location of the berry in the vineyard and the soluble solid content at harvest. Densimetric flotation of the berries permits the reduction of the intra-sample variability that could hinder the differentiation and/or classification of wine grape varieties according to seed mechanical attributes. Cluster analysis classified the wine grape varieties studied into three groups according to seed hardness (low: 32.51 to 40.80 N, intermediate: 42.84 to 44.99 N, high: 46.71 to 57.78 N). The relationships between the seed mechanical properties and the extractable content of phenolic compounds, determined by spectrophotometric and chromatographic reference chemical methods, were evaluated by means of correlation analysis. Linear regression calibration models were developed for each cluster. The statistical parameters highlighted that total flavonoids, proanthocyanidins and flavanols reactive to vanillin can be predicted successfully from the seed mechanical properties for the varieties having low and intermediate seed hardness (SEC% ca. 20, RPIQ > 1.6). For varieties with harder seeds, a satisfactory predictive accuracy seems to require the construction of separate calibration models for each cultivar (Nebbiolo, SEC% ca. 20, RPIQ > 2.2)